📘
TL PhD Comprehensive Exam
  • Introduction
  • Tasklist
  • 1. Basics
    • 1.1 Basic Biology Review
    • 1.2 Basic Genetics Review
    • 1.3 Light & Photosynthesis
  • 2. Coral Biology
    • 2.1 Basic Coral Biology
      • 2.1a Food Webs
    • 2.2 Reef Structure
    • 2.3 Growth & Reproduction
    • 2.4 Morphology
    • 2.5 Physiology
    • 2.6 Mixotrophy & Energy
    • 2.7 Symbiosis
    • 2.8 Reef Mortality
      • 2.8a Conservation
  • 3. Ecology & Evolution
    • 3.1 Evolution & Plasticity
    • 3.2 General Ecology
    • 3.3 Species
    • 3.4 Cryptic Species
  • 4. Isotopes
    • 4.1 Isotope Basics
      • 4.1a Instrumentation & methodology
      • 4.1b Environmental O & H
      • 4.1c Environmental C and N
      • 4.1d Organismal Isotopes
    • 4.2 Fractionation in Corals
    • 4.3 Trophic Niche Analysis
    • 4.4 CSIA
      • 4.4a C: Essential vs. Nonessential
      • 4.4b N: Trophic vs. Source
  • 5. Other
    • 5.1 Science & Society
    • 5.2 Stats
  • 6. Summary & Resources
    • 6.1 Glossary
    • 6.2 Resources
    • 6.3 Questions From Exam
    • 6.4 Recommendations & Reflections
Powered by GitBook
On this page
  1. 3. Ecology & Evolution

3.3 Species

Last updated 1 year ago

a group of living organisms of similar individuals capable of reproducing viable offspring, that are reproductively isolated.

  • "On the Origin of Species" 1859

  • introduced natural selection as a gradual and continuous mechanism of change

  • "organisms in one or more populations that together form a cohesive, reproductive unit—a separate lineage on its own evolutionary trajectory"

Population Genetics aka The Modern Synthesis

  • Mathematical pop gen models identified the genetic mechanisms of evolutionary change

  • 1930s - Fisher, Haldane, Wright, Dobzhansky & more

Biological species concept

  • Mayr 1942

  • New species formation involves reproductive barriers (pre or post zygotic)

  • speciation occurs when mating is no longer viable

  • almost entirely required geographic isolation

1990s Reclassification

  • Reclassification of modes of speciation to focus on the processes driving genetic divergence over geographical divergence

Genetics/genomics

  • studies of a whole genome

  • genomic islands of divergence where a region of genes (single nucleotide to whole chromosome) that exhibits more genetic differentiation than observed randomly

What is a species?

a group of living organisms of similar individuals capable of reproducing viable offspring

Darwin

  • "On the Origin of Species" 1859

  • introduced natural selection as a gradual and continuous mechanism of change

  • "organisms in one or more populations that together form a cohesive, reproductive unit—a separate lineage on its own evolutionary trajectory"

Population Genetics aka The Modern Synthesis

  • Mathematical pop gen models identified the genetic mechanisms of evolutionary change

  • 1930s - Fisher, Haldane, Wright, Dobzhansky & more

Biological species concept

  • Mayr 1942

  • New species formation involves reproductive barriers (pre or post zygotic)

  • speciation occurs when mating is no longer viable

  • almost entirely required geographic isolation

1990s Reclassification

  • Reclassification of modes of speciation to focus on the processes driving genetic divergence over geographical divergence

Genetics/genomics

  • studies of a whole genome

  • genomic islands of divergence where a region of genes (single nucleotide to whole chromosome) that exhibits more genetic differentiation than observed randomly

Species ID

  • in practical modern situations, we rely almost entirely on morphology, geography, and behavior to identify species.

  • behavior - birds

Species ID

  • in practical modern situations, we rely almost entirely on morphology, geography, and behavior to identify species.

  • behavior - birds

How would you determine the total number of species on earth?

  • often overlook microbes, bacteria, etc

estimates = 8.7 billion

Estimate with microbes = 1 trillion

Genetic methods of species identificaiton
Genetic methods of species identificaiton
Nature article on history of evolution & species
The scientific practice of identifying and naming species
26 Species concepts
Nature article on history of evolution & species
The scientific practice of identifying and naming species
26 Species concepts
Paper 1
Paper 2